Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMEM88BA6NKF7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.74■■■□□ 2.19
TMEM88BA6NKF7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
TMEM88BA6NKF7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TMEM88BA6NKF7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.73■■■□□ 2.19
TMEM88BA6NKF7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TMEM88BA6NKF7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
TMEM88BA6NKF7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.72■■■□□ 2.19
TMEM88BA6NKF7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.71■■■□□ 2.19
TMEM88BA6NKF7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TMEM88BA6NKF7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.71■■■□□ 2.19
TMEM88BA6NKF7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.71■■■□□ 2.19
TMEM88BA6NKF7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
TMEM88BA6NKF7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.7■■■□□ 2.18
TMEM88BA6NKF7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.7■■■□□ 2.18
TMEM88BA6NKF7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.18
TMEM88BA6NKF7 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.69■■■□□ 2.18
TMEM88BA6NKF7 SUDS3P1-201ENST00000505831 966 ntBASIC28.69■■■□□ 2.18
TMEM88BA6NKF7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.69■■■□□ 2.18
TMEM88BA6NKF7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM88BA6NKF7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
TMEM88BA6NKF7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
TMEM88BA6NKF7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
TMEM88BA6NKF7 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.68■■■□□ 2.18
TMEM88BA6NKF7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM88BA6NKF7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
TMEM88BA6NKF7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.67■■■□□ 2.18
TMEM88BA6NKF7 AL031432.3-201ENST00000607698 485 ntBASIC28.66■■■□□ 2.18
TMEM88BA6NKF7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.66■■■□□ 2.18
TMEM88BA6NKF7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TMEM88BA6NKF7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TMEM88BA6NKF7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 MIR4281-201ENST00000580852 62 ntBASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.64■■■□□ 2.18
TMEM88BA6NKF7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.63■■■□□ 2.17
TMEM88BA6NKF7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TMEM88BA6NKF7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
TMEM88BA6NKF7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
TMEM88BA6NKF7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.62■■■□□ 2.17
TMEM88BA6NKF7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.62■■■□□ 2.17
TMEM88BA6NKF7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.62■■■□□ 2.17
TMEM88BA6NKF7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.61■■■□□ 2.17
TMEM88BA6NKF7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.61■■■□□ 2.17
TMEM88BA6NKF7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM88BA6NKF7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TMEM88BA6NKF7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.6■■■□□ 2.17
TMEM88BA6NKF7 AP002414.2-202ENST00000590929 1450 ntBASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TMEM88BA6NKF7 UNC93B3-201ENST00000308076 687 ntBASIC28.58■■■□□ 2.17
TMEM88BA6NKF7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TMEM88BA6NKF7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TMEM88BA6NKF7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TMEM88BA6NKF7 MIR6821-201ENST00000617625 74 ntBASIC28.57■■■□□ 2.16
TMEM88BA6NKF7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.57■■■□□ 2.16
TMEM88BA6NKF7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
TMEM88BA6NKF7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
TMEM88BA6NKF7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TMEM88BA6NKF7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.56■■■□□ 2.16
TMEM88BA6NKF7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
TMEM88BA6NKF7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TMEM88BA6NKF7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
TMEM88BA6NKF7 AL136162.1-201ENST00000607711 1078 ntBASIC28.54■■■□□ 2.16
TMEM88BA6NKF7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM88BA6NKF7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM88BA6NKF7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM88BA6NKF7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms