Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 AC120024.1-201ENST00000562672 995 ntBASIC37.72■■■■□ 3.63
PLEKHD1A6NEE1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
PLEKHD1A6NEE1 TSPY9P-201ENST00000440215 945 ntBASIC37.71■■■■□ 3.63
PLEKHD1A6NEE1 TSPY11P-201ENST00000442607 1045 ntBASIC37.71■■■■□ 3.63
PLEKHD1A6NEE1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
PLEKHD1A6NEE1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
PLEKHD1A6NEE1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
PLEKHD1A6NEE1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC37.7■■■■□ 3.63
PLEKHD1A6NEE1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC37.7■■■■□ 3.63
PLEKHD1A6NEE1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
PLEKHD1A6NEE1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC37.67■■■■□ 3.62
PLEKHD1A6NEE1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC37.66■■■■□ 3.62
PLEKHD1A6NEE1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
PLEKHD1A6NEE1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC37.65■■■■□ 3.62
PLEKHD1A6NEE1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
PLEKHD1A6NEE1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC37.65■■■■□ 3.62
PLEKHD1A6NEE1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC37.64■■■■□ 3.62
PLEKHD1A6NEE1 AC092028.1-203ENST00000608262 953 ntBASIC37.64■■■■□ 3.62
PLEKHD1A6NEE1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC37.64■■■■□ 3.62
PLEKHD1A6NEE1 AL139246.5-201ENST00000606645 996 ntBASIC37.63■■■■□ 3.61
PLEKHD1A6NEE1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
PLEKHD1A6NEE1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC37.62■■■■□ 3.61
PLEKHD1A6NEE1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
PLEKHD1A6NEE1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC37.62■■■■□ 3.61
PLEKHD1A6NEE1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
PLEKHD1A6NEE1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
PLEKHD1A6NEE1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC37.6■■■■□ 3.61
PLEKHD1A6NEE1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.6■■■■□ 3.61
PLEKHD1A6NEE1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC37.6■■■■□ 3.61
PLEKHD1A6NEE1 AC131281.2-201ENST00000520478 145 ntBASIC37.59■■■■□ 3.61
PLEKHD1A6NEE1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC37.59■■■■□ 3.61
PLEKHD1A6NEE1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.58■■■■□ 3.61
PLEKHD1A6NEE1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC37.58■■■■□ 3.61
PLEKHD1A6NEE1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
PLEKHD1A6NEE1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC37.58■■■■□ 3.61
PLEKHD1A6NEE1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC37.57■■■■□ 3.6
PLEKHD1A6NEE1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC37.56■■■■□ 3.6
PLEKHD1A6NEE1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
PLEKHD1A6NEE1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
PLEKHD1A6NEE1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
PLEKHD1A6NEE1 SRR-208ENST00000576848 588 ntTSL 4 BASIC37.53■■■■□ 3.6
PLEKHD1A6NEE1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC37.53■■■■□ 3.6
PLEKHD1A6NEE1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC37.53■■■■□ 3.6
PLEKHD1A6NEE1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
PLEKHD1A6NEE1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC37.53■■■■□ 3.6
PLEKHD1A6NEE1 BX255925.1-201ENST00000566954 1854 ntBASIC37.52■■■■□ 3.6
PLEKHD1A6NEE1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC37.52■■■■□ 3.6
PLEKHD1A6NEE1 RALB-208ENST00000631312 311 ntTSL 5 BASIC37.52■■■■□ 3.6
PLEKHD1A6NEE1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.52■■■■□ 3.6
PLEKHD1A6NEE1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
PLEKHD1A6NEE1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC37.51■■■■□ 3.6
PLEKHD1A6NEE1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC37.51■■■■□ 3.6
PLEKHD1A6NEE1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
PLEKHD1A6NEE1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC37.51■■■■□ 3.59
PLEKHD1A6NEE1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC37.5■■■■□ 3.59
PLEKHD1A6NEE1 MIR4281-201ENST00000580852 62 ntBASIC37.5■■■■□ 3.59
PLEKHD1A6NEE1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
PLEKHD1A6NEE1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC37.49■■■■□ 3.59
PLEKHD1A6NEE1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC37.49■■■■□ 3.59
PLEKHD1A6NEE1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
PLEKHD1A6NEE1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC37.48■■■■□ 3.59
PLEKHD1A6NEE1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
PLEKHD1A6NEE1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.48■■■■□ 3.59
PLEKHD1A6NEE1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms