Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.68■■□□□ 1.86
TRIM43BA6NCK2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.67■■□□□ 1.86
TRIM43BA6NCK2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.67■■□□□ 1.86
TRIM43BA6NCK2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.67■■□□□ 1.86
TRIM43BA6NCK2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM43BA6NCK2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 AL117332.1-201ENST00000622628 974 ntBASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM43BA6NCK2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
TRIM43BA6NCK2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.64■■□□□ 1.86
TRIM43BA6NCK2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM43BA6NCK2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 KRT18P10-201ENST00000388836 1287 ntBASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM43BA6NCK2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 AC096631.2-201ENST00000436136 790 ntBASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TRIM43BA6NCK2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 MIR3621-201ENST00000580529 85 ntBASIC26.61■■□□□ 1.85
TRIM43BA6NCK2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.6■■□□□ 1.85
TRIM43BA6NCK2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRIM43BA6NCK2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM43BA6NCK2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM43BA6NCK2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM43BA6NCK2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.58■■□□□ 1.85
TRIM43BA6NCK2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM43BA6NCK2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
TRIM43BA6NCK2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.57■■□□□ 1.84
TRIM43BA6NCK2 MIR4466-201ENST00000606121 54 ntBASIC26.57■■□□□ 1.84
TRIM43BA6NCK2 AC010997.5-201ENST00000609182 354 ntBASIC26.57■■□□□ 1.84
TRIM43BA6NCK2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM43BA6NCK2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM43BA6NCK2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TRIM43BA6NCK2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM43BA6NCK2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM43BA6NCK2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM43BA6NCK2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TRIM43BA6NCK2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM43BA6NCK2 AC092666.2-201ENST00000613287 246 ntBASIC26.54■■□□□ 1.84
TRIM43BA6NCK2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM43BA6NCK2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 MIR6724-1-201ENST00000616420 92 ntBASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 MIR6724-2-201ENST00000616483 92 ntBASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 MIR6724-4-201ENST00000617390 92 ntBASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 MIR6724-3-201ENST00000622482 92 ntBASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.53■■□□□ 1.84
TRIM43BA6NCK2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 AC133561.4-201ENST00000566112 224 ntBASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 MIR4281-201ENST00000580852 62 ntBASIC26.52■■□□□ 1.84
TRIM43BA6NCK2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM43BA6NCK2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms