Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRDV1A0A1B0GX56 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.15■□□□□ 0.98
TRDV1A0A1B0GX56 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.14■□□□□ 0.98
TRDV1A0A1B0GX56 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRDV1A0A1B0GX56 LINC00543-201ENST00000567234 1845 ntBASIC21.14■□□□□ 0.97
TRDV1A0A1B0GX56 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.14■□□□□ 0.97
TRDV1A0A1B0GX56 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRDV1A0A1B0GX56 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRDV1A0A1B0GX56 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRDV1A0A1B0GX56 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
TRDV1A0A1B0GX56 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRDV1A0A1B0GX56 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRDV1A0A1B0GX56 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 SUZ12P1-203ENST00000578195 985 ntBASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRDV1A0A1B0GX56 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRDV1A0A1B0GX56 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRDV1A0A1B0GX56 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRDV1A0A1B0GX56 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRDV1A0A1B0GX56 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRDV1A0A1B0GX56 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRDV1A0A1B0GX56 AC079834.2-201ENST00000609776 1949 ntBASIC21.08■□□□□ 0.97
TRDV1A0A1B0GX56 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRDV1A0A1B0GX56 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRDV1A0A1B0GX56 DUX4L28-201ENST00000623687 678 ntBASIC21.08■□□□□ 0.97
TRDV1A0A1B0GX56 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRDV1A0A1B0GX56 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRDV1A0A1B0GX56 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 AC141586.4-201ENST00000624558 1573 ntBASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.07■□□□□ 0.96
TRDV1A0A1B0GX56 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRDV1A0A1B0GX56 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TRDV1A0A1B0GX56 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRDV1A0A1B0GX56 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.03■□□□□ 0.96
TRDV1A0A1B0GX56 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRDV1A0A1B0GX56 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRDV1A0A1B0GX56 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRDV1A0A1B0GX56 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRDV1A0A1B0GX56 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.02■□□□□ 0.96
TRDV1A0A1B0GX56 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRDV1A0A1B0GX56 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms