Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV27A0A0K0K1C4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV27A0A0K0K1C4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV27A0A0K0K1C4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 AC012676.1-201ENST00000574705 1949 ntBASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 AC021231.2-201ENST00000594613 730 ntBASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV27A0A0K0K1C4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV27A0A0K0K1C4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 LINC00543-201ENST00000567234 1845 ntBASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRBV27A0A0K0K1C4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 AC097639.1-201ENST00000565519 1891 ntBASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 AC008813.1-201ENST00000536597 885 ntBASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV27A0A0K0K1C4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 DUX4L29-201ENST00000425409 679 ntBASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRBV27A0A0K0K1C4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV27A0A0K0K1C4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV27A0A0K0K1C4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 AC133561.1-201ENST00000568600 2415 ntBASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 AC141586.4-201ENST00000624558 1573 ntBASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 SLC6A10P-202ENST00000431994 2058 ntBASIC16.89■□□□□ 0.29
TRBV27A0A0K0K1C4 AL359504.2-201ENST00000605506 1601 ntBASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 MIR219A2-201ENST00000608502 1504 ntBASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 AC148477.6-201ENST00000623746 465 ntBASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV27A0A0K0K1C4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV27A0A0K0K1C4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV27A0A0K0K1C4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 AL162393.1-201ENST00000437852 946 ntBASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 AL359258.2-201ENST00000564063 1566 ntBASIC16.85■□□□□ 0.29
TRBV27A0A0K0K1C4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms