Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV30A0A0K0K1B3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV30A0A0K0K1B3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV30A0A0K0K1B3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV30A0A0K0K1B3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 AC021231.2-201ENST00000594613 730 ntBASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV30A0A0K0K1B3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV30A0A0K0K1B3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV30A0A0K0K1B3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
TRBV30A0A0K0K1B3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV30A0A0K0K1B3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV30A0A0K0K1B3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV30A0A0K0K1B3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV30A0A0K0K1B3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 AC138932.3-201ENST00000567634 1902 ntBASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV30A0A0K0K1B3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRBV30A0A0K0K1B3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV30A0A0K0K1B3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV30A0A0K0K1B3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV30A0A0K0K1B3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 AC022211.4-201ENST00000625094 2161 ntBASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV30A0A0K0K1B3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 LINC01971-201ENST00000617888 1048 ntBASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV30A0A0K0K1B3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms