Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L13-201ENST00000554103 1267 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L15-201ENST00000611059 1267 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L23-201ENST00000615195 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L24-201ENST00000617576 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L22-201ENST00000618238 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L20-201ENST00000619712 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L21-201ENST00000622058 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L10-201ENST00000622460 1267 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 AC148477.6-201ENST00000623746 465 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 DUX4L25-201ENST00000624915 1269 ntBASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IGKV3D-20A0A0C4DH25 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 AL359504.2-201ENST00000605506 1601 ntBASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-20A0A0C4DH25 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 AL359258.2-201ENST00000564063 1566 ntBASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-20A0A0C4DH25 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-20A0A0C4DH25 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGKV3D-20A0A0C4DH25 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.66■□□□□ 0.42
IGKV3D-20A0A0C4DH25 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.66■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IGKV3D-20A0A0C4DH25 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms