Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV6A0A075B6T7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV6A0A075B6T7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV6A0A075B6T7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV6A0A075B6T7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV6A0A075B6T7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV6A0A075B6T7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV6A0A075B6T7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV6A0A075B6T7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV6A0A075B6T7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV6A0A075B6T7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TRAV6A0A075B6T7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 DUSP8P5-201ENST00000422884 1815 ntBASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAV6A0A075B6T7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 AC096887.2-201ENST00000623443 1957 ntBASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV6A0A075B6T7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TRAV6A0A075B6T7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV6A0A075B6T7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 AP002365.1-201ENST00000603448 772 ntBASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV6A0A075B6T7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV6A0A075B6T7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TRAV6A0A075B6T7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV6A0A075B6T7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV6A0A075B6T7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV6A0A075B6T7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV6A0A075B6T7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAV6A0A075B6T7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV6A0A075B6T7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV6A0A075B6T7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV6A0A075B6T7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV6A0A075B6T7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms