Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
BIVM-ERCC5R4GMW8 SLC7A15P-201ENST00000424028 1363 ntBASIC27.79■■■□□ 2.04
BIVM-ERCC5R4GMW8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AL139011.1-202ENST00000642063 584 ntBASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 PGF-202ENST00000405431 666 ntTSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 GIMAP3P-201ENST00000495150 836 ntBASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC007431.3-201ENST00000623221 587 ntBASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
BIVM-ERCC5R4GMW8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 AL391825.1-201ENST00000457671 1364 ntBASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC098859.1-201ENST00000502915 1238 ntBASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
BIVM-ERCC5R4GMW8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC27.76■■■□□ 2.04
BIVM-ERCC5R4GMW8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC27.76■■■□□ 2.04
BIVM-ERCC5R4GMW8 AC092053.1-201ENST00000605787 1936 ntBASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 ATP5G2P4-201ENST00000442175 420 ntBASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 RN7SL618P-201ENST00000477850 296 ntBASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 AC135586.1-201ENST00000539323 574 ntBASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 KRT8P12-202ENST00000472924 1397 ntBASIC27.76■■■□□ 2.03
BIVM-ERCC5R4GMW8 AC134043.2-201ENST00000624206 2238 ntBASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 AC114501.2-201ENST00000439631 535 ntBASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 HILS1-202ENST00000545329 423 ntBASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 PC-204ENST00000524491 1714 ntTSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BIVM-ERCC5R4GMW8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 ARSEP1-201ENST00000420443 635 ntBASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 IGHV3-71-201ENST00000523324 359 ntBASIC27.74■■■□□ 2.03
BIVM-ERCC5R4GMW8 MAX-210ENST00000555419 765 ntTSL 5 BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms