Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA3Q9Y5H0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AC011676.5-201ENST00000624864 2660 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 KRT18P28-201ENST00000453838 1332 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AP002414.1-201ENST00000391405 1147 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 MRPL20P1-201ENST00000400819 433 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 SNHG9-202ENST00000564014 471 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 MIR4469-201ENST00000583919 79 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 GGTLC5P-201ENST00000617623 998 ntBASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA3Q9Y5H0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 HTR5BP-201ENST00000430851 1154 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 ALG1L5P-201ENST00000482043 771 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AC002558.1-201ENST00000488906 803 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AC096734.2-201ENST00000562054 433 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AC018845.2-201ENST00000568326 409 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AL353135.1-201ENST00000606729 504 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 AC009336.1-201ENST00000608941 1553 ntBASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA3Q9Y5H0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA3Q9Y5H0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms