Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 AC112191.1-201ENST00000523689 701 ntBASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 AL096865.1-201ENST00000606796 927 ntBASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 AL023806.1-201ENST00000603994 1649 ntBASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA9Q9Y5G4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 AL513477.1-201ENST00000602865 2407 ntBASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 AP001094.4-201ENST00000579008 2176 ntBASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 AC023141.5-201ENST00000458585 616 ntBASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA9Q9Y5G4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 NKILA-202ENST00000614771 2598 ntBASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 AC022145.2-201ENST00000598203 171 ntBASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA9Q9Y5G4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA9Q9Y5G4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms