Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 AP002490.2-201ENST00000524791 560 ntBASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 ME2P1-201ENST00000426028 1970 ntBASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB1Q9Y5G3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 INGX-201ENST00000359239 846 ntBASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AC004263.2-201ENST00000617183 678 ntBASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AL358472.4-201ENST00000633140 710 ntBASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AC022532.1-201ENST00000624563 1728 ntBASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.59■□□□□ 0.09
PCDHGB1Q9Y5G3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB1Q9Y5G3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB1Q9Y5G3 AK4P3-201ENST00000418260 669 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms