Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHB1Q9Y5F3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 AC136632.2-201ENST00000512891 861 ntBASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHB1Q9Y5F3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 AL590787.1-201ENST00000568856 1315 ntBASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MCCD1P2-201ENST00000423228 335 ntBASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 AC005829.1-201ENST00000570002 483 ntBASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MIR4469-201ENST00000583919 79 ntBASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHB1Q9Y5F3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB1Q9Y5F3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHB1Q9Y5F3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHB1Q9Y5F3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB1Q9Y5F3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHB1Q9Y5F3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHB1Q9Y5F3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms