Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RHBDD3Q9Y3P4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 AL135999.2-201ENST00000622438 1686 ntBASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 NUS1P2-201ENST00000417358 873 ntBASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 MIR5100-201ENST00000579544 119 ntBASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.91□□□□□ -0.02
RHBDD3Q9Y3P4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RHBDD3Q9Y3P4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms