Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AC125634.1-201ENST00000438758 1403 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 COX5BP2-201ENST00000392354 334 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 MINOS1P3-201ENST00000457048 203 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AC009533.2-201ENST00000543664 586 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AP002414.4-201ENST00000589764 1148 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 AC092171.3-201ENST00000610122 2651 ntBASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.47□□□□□ -0.41
HHLA3Q9XRX5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 AL662844.4-201ENST00000606367 2838 ntBASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 DRAXINP1-201ENST00000437611 948 ntBASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.46□□□□□ -0.41
HHLA3Q9XRX5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms