Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PNMA3Q9UL41 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.44■□□□□ 0.7
PNMA3Q9UL41 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.43■□□□□ 0.7
PNMA3Q9UL41 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 EGFEM1P-202ENST00000431685 1563 ntBASIC19.43■□□□□ 0.7
PNMA3Q9UL41 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
PNMA3Q9UL41 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 AC027369.6-201ENST00000525520 931 ntBASIC19.42■□□□□ 0.7
PNMA3Q9UL41 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 AC133963.1-201ENST00000504166 1679 ntBASIC19.42■□□□□ 0.7
PNMA3Q9UL41 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNMA3Q9UL41 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 PIN1P1-201ENST00000412108 996 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 SERBP1P5-201ENST00000510079 1181 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AC105233.2-201ENST00000523697 349 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AP005018.1-201ENST00000525475 301 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AF228730.5-201ENST00000530288 346 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 AC131009.4-201ENST00000624048 1740 ntBASIC19.41■□□□□ 0.7
PNMA3Q9UL41 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.41■□□□□ 0.7
PNMA3Q9UL41 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNMA3Q9UL41 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms