Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC027601.4-201ENST00000611259 610 ntBASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 AC010654.1-201ENST00000615722 808 ntBASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MIR574-201ENST00000385209 96 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 PMS2P1-201ENST00000431037 1228 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 VN2R19P-201ENST00000442399 1052 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 AL591424.1-201ENST00000442569 1213 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 KRT18P58-201ENST00000527480 1120 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 LINC00895-201ENST00000629028 1637 ntBASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRDM9Q9NQV7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 AC087163.2-201ENST00000457299 853 ntBASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 RN7SL371P-201ENST00000578099 267 ntBASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 AC013467.2-201ENST00000605472 835 ntBASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 FAM197Y3-203ENST00000618346 717 ntBASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.03■□□□□ 0.16
PRDM9Q9NQV7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms