Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 FAM220CP-201ENST00000395253 831 ntBASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AL031133.1-201ENST00000406807 723 ntBASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AP002490.2-201ENST00000524791 560 ntBASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AC124864.1-201ENST00000623408 392 ntBASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AL121956.5-201ENST00000625261 221 ntBASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PFDN4Q9NQP4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 HYMAI-201ENST00000635591 3347 ntBASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 PCDHA14-201ENST00000506751 2298 ntBASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 AC125634.1-201ENST00000438758 1403 ntBASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PFDN4Q9NQP4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 BX276092.5-203ENST00000456199 560 ntBASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 AC011840.4-201ENST00000578471 627 ntBASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 AC090616.6-201ENST00000582640 721 ntBASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PFDN4Q9NQP4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms