Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 PRYP5-201ENST00000451909 266 ntBASIC17.91■□□□□ 0.46
CD248Q9HCU0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 UNC93B6-202ENST00000528242 690 ntBASIC17.91■□□□□ 0.46
CD248Q9HCU0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.91■□□□□ 0.46
CD248Q9HCU0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD248Q9HCU0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 AL591424.1-201ENST00000442569 1213 ntBASIC17.9■□□□□ 0.46
CD248Q9HCU0 BX005266.1-201ENST00000473402 457 ntBASIC17.9■□□□□ 0.46
CD248Q9HCU0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 AL022326.1-202ENST00000641533 845 ntBASIC17.9■□□□□ 0.46
CD248Q9HCU0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD248Q9HCU0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.9■□□□□ 0.46
CD248Q9HCU0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.89■□□□□ 0.46
CD248Q9HCU0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD248Q9HCU0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CD248Q9HCU0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.89■□□□□ 0.46
CD248Q9HCU0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD248Q9HCU0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 AC073621.1-201ENST00000392730 636 ntBASIC17.89■□□□□ 0.45
CD248Q9HCU0 MIR1233-2-201ENST00000408138 82 ntBASIC17.89■□□□□ 0.45
CD248Q9HCU0 MIR1233-1-201ENST00000408722 82 ntBASIC17.89■□□□□ 0.45
CD248Q9HCU0 SPDYE21P-201ENST00000413323 827 ntBASIC17.89■□□□□ 0.45
CD248Q9HCU0 MED15P5-201ENST00000423150 992 ntBASIC17.89■□□□□ 0.45
CD248Q9HCU0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD248Q9HCU0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms