Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 FRMD8P1-201ENST00000440433 1524 ntBASIC17.63■□□□□ 0.41
LRRC3Q9BY71 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 BCRP1-201ENST00000444246 691 ntBASIC17.63■□□□□ 0.41
LRRC3Q9BY71 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.63■□□□□ 0.41
LRRC3Q9BY71 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 AL096865.1-201ENST00000606796 927 ntBASIC17.63■□□□□ 0.41
LRRC3Q9BY71 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.63■□□□□ 0.41
LRRC3Q9BY71 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC3Q9BY71 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 AC011467.4-201ENST00000594891 528 ntBASIC17.62■□□□□ 0.41
LRRC3Q9BY71 AC092364.2-202ENST00000597012 1073 ntBASIC17.62■□□□□ 0.41
LRRC3Q9BY71 AP001059.3-201ENST00000619053 235 ntBASIC17.62■□□□□ 0.41
LRRC3Q9BY71 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC3Q9BY71 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.61■□□□□ 0.41
LRRC3Q9BY71 KRT18P32-201ENST00000424695 1287 ntBASIC17.61■□□□□ 0.41
LRRC3Q9BY71 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 AC051619.7-201ENST00000568314 623 ntBASIC17.61■□□□□ 0.41
LRRC3Q9BY71 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 MIR3909-201ENST00000579518 119 ntBASIC17.61■□□□□ 0.41
LRRC3Q9BY71 MPDU1-223ENST00000582151 728 ntBASIC17.61■□□□□ 0.41
LRRC3Q9BY71 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC3Q9BY71 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms