Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 PMS2P4-201ENST00000412466 1052 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CEND1P1-201ENST00000451006 455 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC109635.5-201ENST00000533593 962 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AL161645.1-201ENST00000622716 1255 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC055717.3-201ENST00000622967 595 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC134684.3-201ENST00000641758 218 ntBASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK5RAP1Q96SZ6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 SLC22A20-204ENST00000530038 1673 ntBASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AL121761.2-201ENST00000598007 1648 ntBASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 AC108860.2-201ENST00000562760 2183 ntBASIC17.55■□□□□ 0.4
CDK5RAP1Q96SZ6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 AC254562.1-201ENST00000417586 456 ntBASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 AC092902.6-201ENST00000641783 218 ntBASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDK5RAP1Q96SZ6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms