Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
C9orf85Q96MD7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 IER3-202ENST00000376377 1350 ntBASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC104819.1-201ENST00000504587 486 ntBASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC013467.2-201ENST00000605472 835 ntBASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC010331.1-201ENST00000611423 582 ntBASIC12.31□□□□□ -0.44
C9orf85Q96MD7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
C9orf85Q96MD7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
C9orf85Q96MD7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms