Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AC138761.1-201ENST00000584393 385 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 AJ011932.1-201ENST00000621707 465 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 FRMD8P1-201ENST00000440433 1524 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FGD4Q96M96 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.13■□□□□ 0.65
FGD4Q96M96 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FGD4Q96M96 BCL2-203ENST00000589955 5011 ntBASIC19.13■□□□□ 0.65
FGD4Q96M96 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FGD4Q96M96 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FGD4Q96M96 GNAS-203ENST00000306120 1878 ntBASIC19.12■□□□□ 0.65
FGD4Q96M96 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.12■□□□□ 0.65
FGD4Q96M96 UXT-AS1-201ENST00000590504 1525 ntBASIC19.12■□□□□ 0.65
FGD4Q96M96 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FGD4Q96M96 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.12■□□□□ 0.65
FGD4Q96M96 UGT1A2P-201ENST00000454886 866 ntBASIC19.12■□□□□ 0.65
FGD4Q96M96 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.12■□□□□ 0.65
FGD4Q96M96 MIR3909-201ENST00000579518 119 ntBASIC19.12■□□□□ 0.65
FGD4Q96M96 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
FGD4Q96M96 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FGD4Q96M96 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
FGD4Q96M96 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
FGD4Q96M96 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FGD4Q96M96 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 PCDHB18P-201ENST00000524813 2368 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 AC016396.2-201ENST00000562575 1417 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 MIR346-201ENST00000362234 95 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 MIR943-201ENST00000401286 94 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
FGD4Q96M96 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.11■□□□□ 0.65
FGD4Q96M96 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
FGD4Q96M96 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.11■□□□□ 0.65
FGD4Q96M96 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.11■□□□□ 0.65
FGD4Q96M96 AP000842.3-202ENST00000569238 1080 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 MPDU1-223ENST00000582151 728 ntBASIC19.11■□□□□ 0.65
FGD4Q96M96 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.11■□□□□ 0.65
FGD4Q96M96 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.11■□□□□ 0.65
FGD4Q96M96 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.11■□□□□ 0.65
FGD4Q96M96 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FGD4Q96M96 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FGD4Q96M96 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 FO538757.1-201ENST00000623083 1397 ntBASIC19.1■□□□□ 0.65
FGD4Q96M96 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.1■□□□□ 0.65
FGD4Q96M96 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.1■□□□□ 0.65
FGD4Q96M96 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 IGHV3-62-201ENST00000520057 340 ntBASIC19.1■□□□□ 0.65
FGD4Q96M96 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.1■□□□□ 0.65
FGD4Q96M96 AL138918.1-201ENST00000568306 659 ntBASIC19.1■□□□□ 0.65
FGD4Q96M96 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.1■□□□□ 0.65
FGD4Q96M96 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
FGD4Q96M96 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FGD4Q96M96 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms