Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 AC022211.2-201ENST00000585075 2527 ntBASIC16.45■□□□□ 0.22
LINC00615Q96LM1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 BX842568.4-201ENST00000421222 227 ntBASIC16.45■□□□□ 0.22
LINC00615Q96LM1 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.45■□□□□ 0.22
LINC00615Q96LM1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 AL031055.1-201ENST00000606362 631 ntBASIC16.45■□□□□ 0.22
LINC00615Q96LM1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00615Q96LM1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 MKNK2P1-201ENST00000437526 628 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 AL009183.1-201ENST00000603760 355 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 C20orf181-201ENST00000623918 480 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 AC078925.2-201ENST00000624013 1973 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 AC012313.1-201ENST00000593393 3059 ntBASIC16.44■□□□□ 0.22
LINC00615Q96LM1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00615Q96LM1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC106820.2-201ENST00000563775 3264 ntBASIC16.43■□□□□ 0.22
LINC00615Q96LM1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC002056.1-201ENST00000395613 760 ntBASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC092474.2-201ENST00000424288 719 ntBASIC16.43■□□□□ 0.22
LINC00615Q96LM1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 AC092919.2-201ENST00000623631 1645 ntBASIC16.43■□□□□ 0.22
LINC00615Q96LM1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINC00615Q96LM1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms