Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ITCHQ96J02 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ITCHQ96J02 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.21■□□□□ 0.19
ITCHQ96J02 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.21■□□□□ 0.19
ITCHQ96J02 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.21■□□□□ 0.19
ITCHQ96J02 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 HLA-A-202ENST00000376806 1854 ntBASIC16.21■□□□□ 0.19
ITCHQ96J02 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.21■□□□□ 0.19
ITCHQ96J02 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.21■□□□□ 0.19
ITCHQ96J02 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
ITCHQ96J02 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.21■□□□□ 0.19
ITCHQ96J02 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.21■□□□□ 0.19
ITCHQ96J02 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.21■□□□□ 0.19
ITCHQ96J02 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.21■□□□□ 0.19
ITCHQ96J02 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
ITCHQ96J02 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ITCHQ96J02 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ITCHQ96J02 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ITCHQ96J02 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ITCHQ96J02 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.21■□□□□ 0.19
ITCHQ96J02 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ITCHQ96J02 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ITCHQ96J02 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ITCHQ96J02 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ITCHQ96J02 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ITCHQ96J02 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
ITCHQ96J02 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.21■□□□□ 0.18
ITCHQ96J02 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.2■□□□□ 0.18
ITCHQ96J02 AL391256.1-201ENST00000443260 1855 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
ITCHQ96J02 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.2■□□□□ 0.18
ITCHQ96J02 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ITCHQ96J02 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 AL645728.1-201ENST00000366221 2101 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.2■□□□□ 0.18
ITCHQ96J02 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ITCHQ96J02 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
ITCHQ96J02 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 ACTG1P4-201ENST00000425123 1122 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 SIGLEC30P-201ENST00000455569 941 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 RN7SL850P-201ENST00000579959 291 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 AP005901.3-202ENST00000581653 237 ntBASIC16.2■□□□□ 0.18
ITCHQ96J02 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.2■□□□□ 0.18
ITCHQ96J02 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ITCHQ96J02 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.2■□□□□ 0.18
ITCHQ96J02 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ITCHQ96J02 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.19■□□□□ 0.18
ITCHQ96J02 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
ITCHQ96J02 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ITCHQ96J02 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ITCHQ96J02 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ITCHQ96J02 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.19■□□□□ 0.18
ITCHQ96J02 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.19■□□□□ 0.18
ITCHQ96J02 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.19■□□□□ 0.18
ITCHQ96J02 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ITCHQ96J02 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ITCHQ96J02 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms