Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH3Q96II8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH3Q96II8 AL391825.1-201ENST00000457671 1364 ntBASIC18.28■□□□□ 0.52
LRCH3Q96II8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH3Q96II8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRCH3Q96II8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH3Q96II8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH3Q96II8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH3Q96II8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 CROCCP4-201ENST00000457096 498 ntBASIC18.27■□□□□ 0.52
LRCH3Q96II8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 RNA5SP423-201ENST00000517127 109 ntBASIC18.27■□□□□ 0.52
LRCH3Q96II8 AC135586.1-201ENST00000539323 574 ntBASIC18.27■□□□□ 0.52
LRCH3Q96II8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.27■□□□□ 0.52
LRCH3Q96II8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH3Q96II8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.51
LRCH3Q96II8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LRCH3Q96II8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LRCH3Q96II8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH3Q96II8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC087499.5-201ENST00000452760 1342 ntBASIC18.26■□□□□ 0.51
LRCH3Q96II8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 GMCL1P1-201ENST00000463439 1581 ntBASIC18.26■□□□□ 0.51
LRCH3Q96II8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.26■□□□□ 0.51
LRCH3Q96II8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH3Q96II8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH3Q96II8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 WASH6P-202ENST00000359512 1437 ntBASIC18.25■□□□□ 0.51
LRCH3Q96II8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH3Q96II8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 AL583810.1-201ENST00000553344 1045 ntBASIC18.25■□□□□ 0.51
LRCH3Q96II8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH3Q96II8 AL139099.5-201ENST00000635274 300 ntBASIC18.25■□□□□ 0.51
LRCH3Q96II8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms