Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SIGLEC16-201ENST00000599858 1437 ntBASIC17.55■□□□□ 0.4
IFT43Q96FT9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
IFT43Q96FT9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
IFT43Q96FT9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 ZNF259P1-201ENST00000407656 1365 ntBASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC148477.5-201ENST00000625164 1645 ntBASIC17.54■□□□□ 0.4
IFT43Q96FT9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 SLC25A1P1-201ENST00000528351 927 ntBASIC17.54■□□□□ 0.4
IFT43Q96FT9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 SART3-203ENST00000546611 1184 ntBASIC17.54■□□□□ 0.4
IFT43Q96FT9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
IFT43Q96FT9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.54■□□□□ 0.4
IFT43Q96FT9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 AC093525.9-201ENST00000624961 1746 ntBASIC17.53■□□□□ 0.4
IFT43Q96FT9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 AC116353.5-201ENST00000638148 1699 ntBASIC17.53■□□□□ 0.4
IFT43Q96FT9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 RPL13AP23-201ENST00000480739 586 ntBASIC17.53■□□□□ 0.4
IFT43Q96FT9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 AC116407.3-201ENST00000623905 1129 ntBASIC17.53■□□□□ 0.4
IFT43Q96FT9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT43Q96FT9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
IFT43Q96FT9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 BX005266.1-201ENST00000473402 457 ntBASIC17.52■□□□□ 0.4
IFT43Q96FT9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 AC145285.3-201ENST00000564603 959 ntBASIC17.52■□□□□ 0.4
IFT43Q96FT9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 AL049840.3-201ENST00000602669 611 ntBASIC17.52■□□□□ 0.4
IFT43Q96FT9 AC073592.4-201ENST00000623827 446 ntBASIC17.52■□□□□ 0.4
IFT43Q96FT9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IFT43Q96FT9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT43Q96FT9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.52■□□□□ 0.4
IFT43Q96FT9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms