Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AC002310.6-201ENST00000624451 1377 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 HLA-A-201ENST00000376802 1334 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AC087163.2-201ENST00000457299 853 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AL805961.1-202ENST00000641562 540 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AC018695.7-201ENST00000624587 2492 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AC026691.1-201ENST00000602502 2017 ntBASIC17.28■□□□□ 0.36
RTP4Q96DX8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RTP4Q96DX8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTP4Q96DX8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTP4Q96DX8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTP4Q96DX8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTP4Q96DX8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTP4Q96DX8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTP4Q96DX8 SCARNA2-201ENST00000458748 420 ntBASIC17.27■□□□□ 0.36
RTP4Q96DX8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.27■□□□□ 0.36
RTP4Q96DX8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RTP4Q96DX8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RTP4Q96DX8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.27■□□□□ 0.35
RTP4Q96DX8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTP4Q96DX8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RTP4Q96DX8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTP4Q96DX8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RTP4Q96DX8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.27■□□□□ 0.35
RTP4Q96DX8 ALOX12P2-203ENST00000570921 1945 ntBASIC17.27■□□□□ 0.35
RTP4Q96DX8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RTP4Q96DX8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 PTCHD3P3-201ENST00000403073 906 ntBASIC17.26■□□□□ 0.35
RTP4Q96DX8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 MPDU1-223ENST00000582151 728 ntBASIC17.26■□□□□ 0.35
RTP4Q96DX8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms