Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC093909.1-201ENST00000504731 1122 ntBASIC18.23■□□□□ 0.51
SEMA4DQ92854 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SEMA4DQ92854 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.23■□□□□ 0.51
SEMA4DQ92854 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 MRPL20P1-201ENST00000400819 433 ntBASIC18.22■□□□□ 0.51
SEMA4DQ92854 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 MIR4492-201ENST00000581627 80 ntBASIC18.22■□□□□ 0.51
SEMA4DQ92854 MPDU1-223ENST00000582151 728 ntBASIC18.22■□□□□ 0.51
SEMA4DQ92854 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 PCDHA14-201ENST00000506751 2298 ntBASIC18.22■□□□□ 0.51
SEMA4DQ92854 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 AC006277.1-201ENST00000624348 1610 ntBASIC18.22■□□□□ 0.51
SEMA4DQ92854 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SEMA4DQ92854 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.22■□□□□ 0.51
SEMA4DQ92854 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 SNX33P1-201ENST00000592116 1762 ntBASIC18.21■□□□□ 0.51
SEMA4DQ92854 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SEMA4DQ92854 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SEMA4DQ92854 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.21■□□□□ 0.5
SEMA4DQ92854 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.5
SEMA4DQ92854 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.21■□□□□ 0.5
SEMA4DQ92854 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms