Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 AP002414.1-201ENST00000391405 1147 ntBASIC15.67■□□□□ 0.1
CNOT9Q92600 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT9Q92600 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT9Q92600 SAPCD2P3-201ENST00000455031 850 ntBASIC15.67■□□□□ 0.1
CNOT9Q92600 UNC93B7-201ENST00000509439 705 ntBASIC15.67■□□□□ 0.1
CNOT9Q92600 DUX4L17-201ENST00000557360 1267 ntBASIC15.67■□□□□ 0.1
CNOT9Q92600 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT9Q92600 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT9Q92600 IFNL4P1-201ENST00000607083 540 ntBASIC15.67■□□□□ 0.1
CNOT9Q92600 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CNOT9Q92600 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT9Q92600 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNOT9Q92600 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT9Q92600 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT9Q92600 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT9Q92600 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 PCDHA14-201ENST00000506751 2298 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 NFIC-211ENST00000641145 8399 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AC243591.1-201ENST00000452967 1364 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT9Q92600 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT9Q92600 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT9Q92600 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AL139424.1-201ENST00000607572 797 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AL589182.2-201ENST00000619332 1049 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CNOT9Q92600 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT9Q92600 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 AL118508.1-201ENST00000613502 2345 ntBASIC15.66■□□□□ 0.1
CNOT9Q92600 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT9Q92600 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT9Q92600 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.65■□□□□ 0.1
CNOT9Q92600 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CNOT9Q92600 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.65■□□□□ 0.1
CNOT9Q92600 AC021087.4-201ENST00000563761 564 ntBASIC15.65■□□□□ 0.1
CNOT9Q92600 AC139887.3-201ENST00000568585 713 ntBASIC15.65■□□□□ 0.1
CNOT9Q92600 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.65■□□□□ 0.1
CNOT9Q92600 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CNOT9Q92600 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT9Q92600 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CNOT9Q92600 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT9Q92600 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms