Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMIM4Q8WVI0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 AL135999.2-201ENST00000622438 1686 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 UNC93B2-201ENST00000285383 730 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 C2orf69P3-201ENST00000565542 1120 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 AL512604.3-201ENST00000569583 964 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 AP001412.1-201ENST00000608405 714 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 AC026471.5-201ENST00000615068 467 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 AL359736.2-201ENST00000621992 437 ntBASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SMIM4Q8WVI0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 AC013268.4-201ENST00000637413 2228 ntBASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SMIM4Q8WVI0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 KRT18P48-201ENST00000434763 852 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 UBE2SP1-201ENST00000450587 669 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 AC068472.1-201ENST00000474589 881 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 KRT18P6-201ENST00000555540 1265 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 AP005117.1-202ENST00000581724 1908 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.52□□□□□ -0.09
SMIM4Q8WVI0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 TNRC18P2-201ENST00000417666 2714 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms