Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 AC003669.1-201ENST00000334569 611 ntBASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 ELK2BP-201ENST00000415014 1224 ntBASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC33Q8N5R6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 AC016396.2-201ENST00000562575 1417 ntBASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC33Q8N5R6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 MTDHP5-201ENST00000598980 586 ntBASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 AC004706.3-202ENST00000621574 984 ntBASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC33Q8N5R6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms