Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM42Q8IWZ5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 AC117947.1-201ENST00000427448 529 ntBASIC17■□□□□ 0.31
TRIM42Q8IWZ5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 COX11P1-201ENST00000489116 835 ntBASIC17■□□□□ 0.31
TRIM42Q8IWZ5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 AC140113.3-201ENST00000605663 199 ntBASIC17■□□□□ 0.31
TRIM42Q8IWZ5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM42Q8IWZ5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 GPR32P1-201ENST00000601788 811 ntBASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 AL590326.2-201ENST00000625139 305 ntBASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 AC079328.2-201ENST00000561241 3354 ntBASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 AL391256.1-201ENST00000443260 1855 ntBASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM42Q8IWZ5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 AC103564.2-201ENST00000432853 1299 ntBASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 YBX1P2-201ENST00000489612 999 ntBASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 AC122714.2-201ENST00000502787 707 ntBASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 ZNF444P1-201ENST00000559497 298 ntBASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 AL031432.5-201ENST00000641059 760 ntBASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM42Q8IWZ5 MTHFR-217ENST00000641820 1569 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms