Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN4BQ8IWT1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 SNHG9-202ENST00000564014 471 ntBASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 AP002472.1-201ENST00000577490 586 ntBASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN4BQ8IWT1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AC012569.1-201ENST00000591191 1524 ntBASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AC092053.1-201ENST00000605787 1936 ntBASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AL021920.2-201ENST00000624828 1351 ntBASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SCN4BQ8IWT1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AL023806.1-201ENST00000603994 1649 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 AL353732.1-201ENST00000569618 1459 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 TOP3BP1-201ENST00000420768 1380 ntBASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCN4BQ8IWT1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms