Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.06■□□□□ 0
LINC00346Q8IVM7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.06■□□□□ 0
LINC00346Q8IVM7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LINC00346Q8IVM7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.05■□□□□ 0
LINC00346Q8IVM7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.05■□□□□ 0
LINC00346Q8IVM7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.05■□□□□ 0
LINC00346Q8IVM7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
LINC00346Q8IVM7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.05■□□□□ 0
LINC00346Q8IVM7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.05■□□□□ -0
LINC00346Q8IVM7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
LINC00346Q8IVM7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.04■□□□□ -0
LINC00346Q8IVM7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 NKAPP1-205ENST00000585790 367 ntBASIC15.04■□□□□ -0
LINC00346Q8IVM7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.04■□□□□ -0
LINC00346Q8IVM7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
LINC00346Q8IVM7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms