Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AP003097.1-201ENST00000530657 1135 ntBASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AC124016.1-201ENST00000609552 612 ntBASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.43■□□□□ 0.06
CROCCP3Q8IVE0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 RARRES2P6-201ENST00000567333 442 ntBASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 MIR600HG-201ENST00000449175 5984 ntBASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.42■□□□□ 0.06
CROCCP3Q8IVE0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AC098934.4-201ENST00000564127 592 ntBASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 DGCR10-201ENST00000609839 495 ntBASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 LINC01311-201ENST00000565162 1445 ntBASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CROCCP3Q8IVE0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.4■□□□□ 0.06
CROCCP3Q8IVE0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms