Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 AC006449.6-201ENST00000612330 2296 ntBASIC18.23■□□□□ 0.51
TMEM139Q8IV31 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 AC090616.6-201ENST00000582640 721 ntBASIC18.23■□□□□ 0.51
TMEM139Q8IV31 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 AL512652.2-201ENST00000625156 1716 ntBASIC18.23■□□□□ 0.51
TMEM139Q8IV31 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM139Q8IV31 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 IGHV3-41-201ENST00000613121 348 ntBASIC18.22■□□□□ 0.51
TMEM139Q8IV31 AC097493.4-201ENST00000641197 219 ntBASIC18.22■□□□□ 0.51
TMEM139Q8IV31 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM139Q8IV31 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 AC013268.4-201ENST00000637413 2228 ntBASIC18.21■□□□□ 0.51
TMEM139Q8IV31 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 AC005363.2-201ENST00000618631 242 ntBASIC18.21■□□□□ 0.51
TMEM139Q8IV31 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 DBET-201ENST00000630918 3363 ntBASIC18.21■□□□□ 0.51
TMEM139Q8IV31 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 INTS4P1-201ENST00000438455 1935 ntBASIC18.21■□□□□ 0.51
TMEM139Q8IV31 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM139Q8IV31 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM139Q8IV31 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM139Q8IV31 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM139Q8IV31 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 AP005117.1-202ENST00000581724 1908 ntBASIC18.2■□□□□ 0.5
TMEM139Q8IV31 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM139Q8IV31 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms