Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF135Q8IUD6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF135Q8IUD6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 TUBB3P1-201ENST00000405796 1332 ntBASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 MIR6752-201ENST00000618442 71 ntBASIC18.01■□□□□ 0.47
RNF135Q8IUD6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.01■□□□□ 0.47
RNF135Q8IUD6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF135Q8IUD6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18■□□□□ 0.47
RNF135Q8IUD6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18■□□□□ 0.47
RNF135Q8IUD6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF135Q8IUD6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF135Q8IUD6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 LINC00896-202ENST00000609602 2128 ntBASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC106820.2-201ENST00000563775 3264 ntBASIC17.99■□□□□ 0.47
RNF135Q8IUD6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RNF135Q8IUD6 KLF2P3-201ENST00000451977 1087 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms