Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 NCF1C-201ENST00000438382 1427 ntBASIC17.68■□□□□ 0.42
RFX6Q8HWS3 PRYP5-201ENST00000451909 266 ntBASIC17.68■□□□□ 0.42
RFX6Q8HWS3 AC091304.2-201ENST00000564639 760 ntBASIC17.68■□□□□ 0.42
RFX6Q8HWS3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 AL139288.1-201ENST00000623748 933 ntBASIC17.68■□□□□ 0.42
RFX6Q8HWS3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 AL590787.1-201ENST00000568856 1315 ntBASIC17.68■□□□□ 0.42
RFX6Q8HWS3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX6Q8HWS3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFX6Q8HWS3 AC243591.1-201ENST00000452967 1364 ntBASIC17.66■□□□□ 0.42
RFX6Q8HWS3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AP002490.2-201ENST00000524791 560 ntBASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AC008608.2-201ENST00000606089 416 ntBASIC17.66■□□□□ 0.42
RFX6Q8HWS3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFX6Q8HWS3 AL021920.2-201ENST00000624828 1351 ntBASIC17.66■□□□□ 0.42
RFX6Q8HWS3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms