Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL23A1Q86Y22 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL23A1Q86Y22 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL23A1Q86Y22 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL23A1Q86Y22 EGFEM1P-202ENST00000431685 1563 ntBASIC21.02■□□□□ 0.95
COL23A1Q86Y22 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL23A1Q86Y22 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 AC098859.1-201ENST00000502915 1238 ntBASIC21.01■□□□□ 0.95
COL23A1Q86Y22 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 AC023310.3-201ENST00000557027 670 ntBASIC21.01■□□□□ 0.95
COL23A1Q86Y22 AC100756.1-201ENST00000562736 682 ntBASIC21.01■□□□□ 0.95
COL23A1Q86Y22 AC138749.3-201ENST00000567691 622 ntBASIC21.01■□□□□ 0.95
COL23A1Q86Y22 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 AC116165.1-201ENST00000611806 668 ntBASIC21.01■□□□□ 0.95
COL23A1Q86Y22 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL23A1Q86Y22 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
COL23A1Q86Y22 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 NME6-203ENST00000415644 849 ntTSL 2 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 ACTBP11-201ENST00000436287 1126 ntBASIC21■□□□□ 0.95
COL23A1Q86Y22 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RNA5SP410-201ENST00000516285 106 ntBASIC21■□□□□ 0.95
COL23A1Q86Y22 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC123567.1-201ENST00000548294 1261 ntBASIC21■□□□□ 0.95
COL23A1Q86Y22 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
COL23A1Q86Y22 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21■□□□□ 0.95
COL23A1Q86Y22 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21■□□□□ 0.95
COL23A1Q86Y22 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
COL23A1Q86Y22 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL23A1Q86Y22 AC087289.5-201ENST00000586076 3175 ntBASIC20.99■□□□□ 0.95
COL23A1Q86Y22 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AL589987.1-201ENST00000453380 819 ntBASIC20.99■□□□□ 0.95
COL23A1Q86Y22 TPRX2P-201ENST00000535362 881 ntBASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AC008735.3-201ENST00000596646 500 ntBASIC20.99■□□□□ 0.95
COL23A1Q86Y22 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AC004461.2-201ENST00000629517 803 ntBASIC20.99■□□□□ 0.95
COL23A1Q86Y22 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL23A1Q86Y22 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL23A1Q86Y22 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL23A1Q86Y22 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.98■□□□□ 0.95
COL23A1Q86Y22 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL23A1Q86Y22 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms