Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.88□□□□□ -0.03
C11orf88Q6PI97 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 HOXB1-202ENST00000577092 1414 ntBASIC14.88□□□□□ -0.03
C11orf88Q6PI97 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.88□□□□□ -0.03
C11orf88Q6PI97 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 VENTXP5-201ENST00000523979 775 ntBASIC14.87□□□□□ -0.03
C11orf88Q6PI97 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AC100803.2-201ENST00000562459 1963 ntBASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
C11orf88Q6PI97 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms