Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NFRKBQ6P4R8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NFRKBQ6P4R8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
NFRKBQ6P4R8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AC011467.4-201ENST00000594891 528 ntBASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 ACTL9-202ENST00000612068 1252 ntBASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AL139327.4-201ENST00000612362 153 ntBASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 LINC01451-201ENST00000623792 534 ntBASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFRKBQ6P4R8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 AL513480.1-201ENST00000451731 511 ntBASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 HLA-J-203ENST00000494367 1087 ntBASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 NKILA-202ENST00000614771 2598 ntBASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFRKBQ6P4R8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC112191.1-201ENST00000523689 701 ntBASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC004449.1-201ENST00000564240 433 ntBASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC022145.2-201ENST00000598203 171 ntBASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 TNRC18P3-201ENST00000441896 2691 ntBASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC011676.5-201ENST00000624864 2660 ntBASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFRKBQ6P4R8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms