Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.9■□□□□ 0.78
RHBDL3P58872 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.9■□□□□ 0.78
RHBDL3P58872 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RHBDL3P58872 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.9■□□□□ 0.78
RHBDL3P58872 AC140878.1-201ENST00000565277 250 ntBASIC19.9■□□□□ 0.78
RHBDL3P58872 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RHBDL3P58872 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.9■□□□□ 0.78
RHBDL3P58872 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RHBDL3P58872 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.9■□□□□ 0.78
RHBDL3P58872 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RHBDL3P58872 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDL3P58872 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.89■□□□□ 0.78
RHBDL3P58872 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 MIR943-201ENST00000401286 94 ntBASIC19.89■□□□□ 0.77
RHBDL3P58872 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.89■□□□□ 0.77
RHBDL3P58872 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 AC125807.1-201ENST00000483097 614 ntBASIC19.89■□□□□ 0.77
RHBDL3P58872 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.89■□□□□ 0.77
RHBDL3P58872 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.89■□□□□ 0.77
RHBDL3P58872 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDL3P58872 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDL3P58872 AC139713.2-201ENST00000641328 2723 ntBASIC19.89■□□□□ 0.77
RHBDL3P58872 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.88■□□□□ 0.77
RHBDL3P58872 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RHBDL3P58872 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 FO538757.1-201ENST00000623083 1397 ntBASIC19.88■□□□□ 0.77
RHBDL3P58872 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RHBDL3P58872 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 SPDYE7P-202ENST00000420373 878 ntBASIC19.88■□□□□ 0.77
RHBDL3P58872 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.88■□□□□ 0.77
RHBDL3P58872 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.88■□□□□ 0.77
RHBDL3P58872 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.88■□□□□ 0.77
RHBDL3P58872 AC093214.1-201ENST00000511688 1107 ntBASIC19.88■□□□□ 0.77
RHBDL3P58872 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.88■□□□□ 0.77
RHBDL3P58872 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.88■□□□□ 0.77
RHBDL3P58872 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.88■□□□□ 0.77
RHBDL3P58872 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.88■□□□□ 0.77
RHBDL3P58872 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.88■□□□□ 0.77
RHBDL3P58872 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDL3P58872 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RHBDL3P58872 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
RHBDL3P58872 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RHBDL3P58872 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 TREML5P-201ENST00000421694 576 ntBASIC19.87■□□□□ 0.77
RHBDL3P58872 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.87■□□□□ 0.77
RHBDL3P58872 KRT18P34-201ENST00000488218 1270 ntBASIC19.87■□□□□ 0.77
RHBDL3P58872 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.87■□□□□ 0.77
RHBDL3P58872 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 AC105233.2-201ENST00000523697 349 ntBASIC19.87■□□□□ 0.77
RHBDL3P58872 AF228730.5-201ENST00000530288 346 ntBASIC19.87■□□□□ 0.77
RHBDL3P58872 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.87■□□□□ 0.77
RHBDL3P58872 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 MIR6080-201ENST00000617359 66 ntBASIC19.87■□□□□ 0.77
RHBDL3P58872 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.87■□□□□ 0.77
RHBDL3P58872 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RHBDL3P58872 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.87■□□□□ 0.77
RHBDL3P58872 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms