Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH15P55291 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH15P55291 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH15P55291 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH15P55291 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH15P55291 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH15P55291 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDH15P55291 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CDH15P55291 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH15P55291 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CDH15P55291 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 AC009065.1-201ENST00000564055 1225 ntBASIC15.89■□□□□ 0.13
CDH15P55291 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
CDH15P55291 AL358472.4-201ENST00000633140 710 ntBASIC15.89■□□□□ 0.13
CDH15P55291 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDH15P55291 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH15P55291 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH15P55291 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH15P55291 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH15P55291 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 HLA-A-202ENST00000376806 1854 ntBASIC15.88■□□□□ 0.13
CDH15P55291 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 KRT8P7-201ENST00000533003 1432 ntBASIC15.88■□□□□ 0.13
CDH15P55291 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 UPK3BP1-201ENST00000428678 509 ntBASIC15.88■□□□□ 0.13
CDH15P55291 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH15P55291 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH15P55291 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH15P55291 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
CDH15P55291 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH15P55291 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH15P55291 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH15P55291 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH15P55291 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH15P55291 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH15P55291 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CDH15P55291 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH15P55291 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH15P55291 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH15P55291 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms