Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH12P55289 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH12P55289 CYP2T1P-202ENST00000641596 2535 ntBASIC15.87■□□□□ 0.13
CDH12P55289 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 AL135999.2-201ENST00000622438 1686 ntBASIC15.86■□□□□ 0.13
CDH12P55289 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH12P55289 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CDH12P55289 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 FRMD8P1-201ENST00000440433 1524 ntBASIC15.86■□□□□ 0.13
CDH12P55289 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CDH12P55289 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH12P55289 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH12P55289 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH12P55289 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 AC087388.1-201ENST00000571370 1112 ntBASIC15.86■□□□□ 0.13
CDH12P55289 AC011467.2-201ENST00000598425 242 ntBASIC15.86■□□□□ 0.13
CDH12P55289 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH12P55289 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH12P55289 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 AC233702.3-201ENST00000578656 1387 ntBASIC15.86■□□□□ 0.13
CDH12P55289 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CDH12P55289 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH12P55289 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH12P55289 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH12P55289 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 TP73-AS1-210ENST00000637775 1455 ntBASIC15.85■□□□□ 0.13
CDH12P55289 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH12P55289 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 AC092364.2-201ENST00000596710 2692 ntBASIC15.85■□□□□ 0.13
CDH12P55289 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH12P55289 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH12P55289 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 AP002383.4-201ENST00000442518 975 ntBASIC15.85■□□□□ 0.13
CDH12P55289 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH12P55289 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDH12P55289 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.85■□□□□ 0.13
CDH12P55289 AL590326.2-201ENST00000625139 305 ntBASIC15.85■□□□□ 0.13
CDH12P55289 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH12P55289 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH12P55289 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH12P55289 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH12P55289 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms