Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.58■■□□□ 1.05
BRPF1P55201 HLA-J-202ENST00000469281 1241 ntBASIC21.58■■□□□ 1.05
BRPF1P55201 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRPF1P55201 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.58■■□□□ 1.05
BRPF1P55201 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRPF1P55201 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.58■■□□□ 1.05
BRPF1P55201 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.58■■□□□ 1.05
BRPF1P55201 AC092364.2-202ENST00000597012 1073 ntBASIC21.58■■□□□ 1.05
BRPF1P55201 Z83851.2-201ENST00000609564 659 ntBASIC21.58■■□□□ 1.05
BRPF1P55201 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRPF1P55201 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRPF1P55201 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
BRPF1P55201 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRPF1P55201 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRPF1P55201 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.57■■□□□ 1.04
BRPF1P55201 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.57■■□□□ 1.04
BRPF1P55201 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.57■■□□□ 1.04
BRPF1P55201 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.57■■□□□ 1.04
BRPF1P55201 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.57■■□□□ 1.04
BRPF1P55201 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.57■■□□□ 1.04
BRPF1P55201 AP006288.1-201ENST00000446065 395 ntBASIC21.57■■□□□ 1.04
BRPF1P55201 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
BRPF1P55201 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.57■■□□□ 1.04
BRPF1P55201 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.57■■□□□ 1.04
BRPF1P55201 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.57■■□□□ 1.04
BRPF1P55201 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRPF1P55201 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.56■■□□□ 1.04
BRPF1P55201 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 AL603756.1-201ENST00000606511 2163 ntBASIC21.56■■□□□ 1.04
BRPF1P55201 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 AC131009.4-201ENST00000624048 1740 ntBASIC21.56■■□□□ 1.04
BRPF1P55201 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.56■■□□□ 1.04
BRPF1P55201 FAM8A3P-201ENST00000427218 844 ntBASIC21.56■■□□□ 1.04
BRPF1P55201 RHOQP3-201ENST00000437982 621 ntBASIC21.56■■□□□ 1.04
BRPF1P55201 METTL21AP1-201ENST00000438852 635 ntBASIC21.56■■□□□ 1.04
BRPF1P55201 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BRPF1P55201 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.56■■□□□ 1.04
BRPF1P55201 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.56■■□□□ 1.04
BRPF1P55201 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.56■■□□□ 1.04
BRPF1P55201 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRPF1P55201 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.55■■□□□ 1.04
BRPF1P55201 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
BRPF1P55201 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.55■■□□□ 1.04
BRPF1P55201 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRPF1P55201 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRPF1P55201 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRPF1P55201 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRPF1P55201 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRPF1P55201 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.55■■□□□ 1.04
BRPF1P55201 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms