Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.45■□□□□ 0.7
HMGCS2P54868 SERBP1P5-201ENST00000510079 1181 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 AC027369.6-201ENST00000525520 931 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 RARRES2P9-201ENST00000565168 469 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 AC021097.1-201ENST00000607902 574 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 AC018529.1-201ENST00000613063 361 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 AC073592.8-201ENST00000624126 511 ntBASIC19.45■□□□□ 0.7
HMGCS2P54868 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS2P54868 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGCS2P54868 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGCS2P54868 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGCS2P54868 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGCS2P54868 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HMGCS2P54868 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 AC100757.3-201ENST00000622361 1406 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 AL390961.4-201ENST00000623958 2535 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 MRPS18AP1-201ENST00000414458 589 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 AC105233.2-201ENST00000523697 349 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 AF228730.5-201ENST00000530288 346 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 AC003101.2-201ENST00000612557 442 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 AP3S2-216ENST00000617003 1561 ntBASIC19.44■□□□□ 0.7
HMGCS2P54868 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGCS2P54868 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGCS2P54868 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGCS2P54868 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGCS2P54868 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HMGCS2P54868 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.43■□□□□ 0.7
HMGCS2P54868 AP005018.1-201ENST00000525475 301 ntBASIC19.43■□□□□ 0.7
HMGCS2P54868 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGCS2P54868 AL590560.3-201ENST00000623350 461 ntBASIC19.43■□□□□ 0.7
HMGCS2P54868 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGCS2P54868 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGCS2P54868 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGCS2P54868 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCS2P54868 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.42■□□□□ 0.7
HMGCS2P54868 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCS2P54868 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 KRT18P34-201ENST00000488218 1270 ntBASIC19.42■□□□□ 0.7
HMGCS2P54868 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCS2P54868 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGCS2P54868 SPDYE12P-201ENST00000618416 771 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms