Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HCFC1P51610 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HCFC1P51610 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCFC1P51610 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.71□□□□□ -0.05
HCFC1P51610 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.71□□□□□ -0.05
HCFC1P51610 SPDYE22P-201ENST00000582158 798 ntBASIC14.71□□□□□ -0.05
HCFC1P51610 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.71□□□□□ -0.05
HCFC1P51610 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.71□□□□□ -0.05
HCFC1P51610 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HCFC1P51610 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HCFC1P51610 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HCFC1P51610 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.71□□□□□ -0.06
HCFC1P51610 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
HCFC1P51610 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HCFC1P51610 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
HCFC1P51610 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.71□□□□□ -0.06
HCFC1P51610 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.71□□□□□ -0.06
HCFC1P51610 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 TERF1P3-201ENST00000505638 1227 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 AC131009.4-201ENST00000624048 1740 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 FOXO1B-201ENST00000504678 1527 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCFC1P51610 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.7□□□□□ -0.06
HCFC1P51610 GAPDHP21-201ENST00000450301 1010 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 INGX-202ENST00000489074 768 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 IGHV3-42-201ENST00000520410 361 ntBASIC14.7□□□□□ -0.06
HCFC1P51610 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.7□□□□□ -0.06
HCFC1P51610 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.7□□□□□ -0.06
HCFC1P51610 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HCFC1P51610 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.69□□□□□ -0.06
HCFC1P51610 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HCFC1P51610 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.69□□□□□ -0.06
HCFC1P51610 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.69□□□□□ -0.06
HCFC1P51610 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.69□□□□□ -0.06
HCFC1P51610 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.69□□□□□ -0.06
HCFC1P51610 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HCFC1P51610 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HCFC1P51610 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.68□□□□□ -0.06
HCFC1P51610 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
HCFC1P51610 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
HCFC1P51610 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.68□□□□□ -0.06
HCFC1P51610 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCFC1P51610 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HCFC1P51610 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.68□□□□□ -0.06
HCFC1P51610 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.68□□□□□ -0.06
HCFC1P51610 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms