Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5CP51148 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB5CP51148 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB5CP51148 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RAB5CP51148 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 CICP14-201ENST00000629111 2732 ntBASIC13.69□□□□□ -0.22
RAB5CP51148 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB5CP51148 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB5CP51148 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.69□□□□□ -0.22
RAB5CP51148 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB5CP51148 AC096733.2-201ENST00000609937 1394 ntBASIC13.69□□□□□ -0.22
RAB5CP51148 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.69□□□□□ -0.22
RAB5CP51148 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.69□□□□□ -0.22
RAB5CP51148 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB5CP51148 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.68□□□□□ -0.22
RAB5CP51148 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 EGFEM1P-202ENST00000431685 1563 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 RPS2P4-201ENST00000476944 856 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RAB5CP51148 AC113404.2-201ENST00000507884 177 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 AL603832.2-201ENST00000566195 2125 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.68□□□□□ -0.22
RAB5CP51148 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAB5CP51148 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAB5CP51148 MTDHP1-201ENST00000605323 784 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.68□□□□□ -0.22
RAB5CP51148 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAB5CP51148 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RAB5CP51148 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RAB5CP51148 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAB5CP51148 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.68□□□□□ -0.22
RAB5CP51148 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms