Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.29■□□□□ 0.2
HLCSP50747 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLCSP50747 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLCSP50747 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.29■□□□□ 0.2
HLCSP50747 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLCSP50747 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HLCSP50747 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
HLCSP50747 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.29■□□□□ 0.2
HLCSP50747 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLCSP50747 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLCSP50747 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLCSP50747 CYP2T1P-202ENST00000641596 2535 ntBASIC16.28■□□□□ 0.2
HLCSP50747 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 AL031284.1-201ENST00000419297 478 ntBASIC16.28■□□□□ 0.2
HLCSP50747 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.28■□□□□ 0.2
HLCSP50747 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 AP000867.4-201ENST00000641616 219 ntBASIC16.28■□□□□ 0.2
HLCSP50747 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLCSP50747 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.28■□□□□ 0.2
HLCSP50747 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLCSP50747 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
HLCSP50747 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.27■□□□□ 0.2
HLCSP50747 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.27■□□□□ 0.2
HLCSP50747 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 AC093909.1-201ENST00000504731 1122 ntBASIC16.27■□□□□ 0.2
HLCSP50747 RNA5SP419-201ENST00000515908 135 ntBASIC16.27■□□□□ 0.2
HLCSP50747 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 AL139288.1-201ENST00000623748 933 ntBASIC16.27■□□□□ 0.2
HLCSP50747 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.27■□□□□ 0.2
HLCSP50747 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLCSP50747 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLCSP50747 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLCSP50747 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.27■□□□□ 0.19
HLCSP50747 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLCSP50747 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.27■□□□□ 0.19
HLCSP50747 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
HLCSP50747 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLCSP50747 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLCSP50747 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HLCSP50747 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLCSP50747 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLCSP50747 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HLCSP50747 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.26■□□□□ 0.19
HLCSP50747 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLCSP50747 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.26■□□□□ 0.19
HLCSP50747 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLCSP50747 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLCSP50747 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms